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12 April 2002Recent research on some "single-gene" diseases has begun to shed light on the complexity of the relationship between genotype and phenotype. Hirschsprung disease is a rare congenital disorder in which part of the rectum or colon lacks nerve cells, affecting bowel motility and resulting in severe constipation and bowel obstruction. The disease shows variable phenotype, for example some patients lack nerve cells in the rectum (short-segment disease) while in some a much larger segment of the colon is involved (long-segment disease). Mutations in any of several different genes have been shown to cause the disease. In some patients, disease is associated with loss-of-function mutations in the RET proto-oncogene and there is evidence that polymorphisms in this same gene (that is, genetic variants also found in normal individuals) can affect the phenotype of Hirschsprung patients. Fitze et al have analysed the relationship between RET mutations and polymorphisms and the disease phenotype in 76 patients with Hirschsprung’s disease [Fitze, G. et al (2002) Lancet 359, 1200-1205]. They found evidence that the disease phenotype is affected both by variants in different genes and between interactions between genetic variants in the same gene. For example, they found that the 18 patients who had RET mutations were significantly more likely to have the long-segment phenotype than those without RET mutations. In addition, patients homozygous for the AA form of the c135G/A polymorphism in the RET gene were much less likely to have RET mutations than those with the GA or GG genotypes. Moreover, in patients with the long-segment phenotype who had a RET mutation and the GA genotype, the RET mutation was usually on the same chromosome as the G allele, suggesting that these variants might interact to affect the expression of the gene.
Comment: The results of this study, which are also discussed in the accompanying editorial by McCabe, illustrate modes of genetic interaction, and ways in which these interactions can affect phenotype, that are likely also to be relevant to the pathogenesis of common polygenic disease such as coronary heart disease.
14 April 2002An international team of researchers has reported that four out of five baby boys treated by gene therapy for X-linked severe combined immunodeficiency (SCID) have remained healthy for two years after treatment [Hacein-Bey-Abina, S. et al (2002) N Engl J Med 346, 1195-1193]. X-linked SCID is caused by mutations in the gene encoding a common protein segment which forms part of five different cell-surface receptors that are essential for normal development of T cells and natural killer cells in the immune system. The boys were treated by removing their bone marrow cells and transducing them with a viral vector containing a normal copy of the defective gene. The cells were then infused back into the patients. In the four boys who responded to the treatment, T cells and natural killer cells containing the transduced normal gene were found in the blood within four months, and in higher numbers than are observed when affected babies are treated by bone marrow transplantation from tissue-matched donors. The boys also developed normal numbers of B cells, enabling them to mount near-normal antibody responses so that they could be successfully vaccinated against severe childhood diseases and did not need continuing immunoglobulin treatment.
Comment: This paper builds on the initial success in treating X-linked SCID that was reported by the same researchers in 2000 [Cavazzana-Calvo, M. et al (2000) Science 288, 669-672 (Abstract)]. Treatment by gene therapy appears to offer several advantages over treatment by bone marrow transplantation, and may become the treatment of choice for this disease. An accompanying editorial by Rosen gives useful background information about genetic immunodeficiency diseases and the history of attempts to treat them by bone marrow transplantation and gene therapy. (19/4/02)
23 April 2002A mutation in the CHEK2 gene, which encodes a protein involved in preventing division of cells that have damaged DNA, may be implicated in increased susceptibility to breast cancer in individuals who do not carry a mutation in either the BRCA1 or BRCA2 gene [The CHEK2-Breast Cancer Consortium (2002), advance on-line publication in Nature Genetics]. The CHEK2 mutation was found in 1.1% of control individuals in populations from Europe and North America but in 5.1% of patients from breast cancer families who were negative for BRCA1 and BRCA2 mutations (p=0.00000003). The frequency of the mutation in patients from breast cancer families who carried BRCA1 or BRCA2 mutations was the same as in controls. The penetrance of the CHEK2 mutation appears to be low, conferring approximately a two-fold increase in risk of breast cancer in women, and a ten-fold increased risk in men. Several different genetic variants have been proposed as low-penetrance susceptibility alleles for breast cancer, but the CHEK2 consortium claims that this is the first to show such high statistical significance.
Comment: It is difficult to predict the eventual clinical significance of this work, as it is uncertain whether genetic testing for a variant conferring a relative risk of two would be seen as worthwhile, or what intervention should be offered to individuals carrying the mutation. The findings also need independent confirmation from other research groups.